I just did something similar yesterday when resetting an old tank for my upcoming Chrom.'s
What I did was, I took out the internal filter, rinsed the sponge parts from the mulm and left the water with the ceramic noodles alone.
In my opinion, if you didn't rinse the filtering media where the actual bacterial colonies live, you didn't wash the bacteria off so you shouldn't go through cycling again. Also injecting bottom material from a long running tank was a good idea, since it contains a lot of bacteria.
The shrimp shouldn't be affected by NO2 the way fish are anyway, because their respiratory pigments are different (copper- and not iron-based if I remember correctly). However, they're still a bit on the sensitive side when it comes to sudden changes in water parameters. I'd suggest you acclimate them to the new conditions using the 'drop-by-drop' method. I hope I was of some help.
francesco
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