Sucked into the filter or stuck at the strainer at the filter inlet pipe? If the strainer is the standard Ehiem one and its stuck at the strainer, then I'ld say the SAE died first.
Which filter are you running anyway? My strongest filter is rated at about 900 or 1000l/hr, but I haven't come across live fishes getting stuck on it... and this is with my SAE's frequently loitering around the strainer.
Fish fry and shrimp larvae will get sucked in though.
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