Hard to understand the situation, but my experience with shrimps is that they don't do well to sudden changes.
My cherry reds can be pushed to live in rather dirty conditions before a few of them start to go belly over. But if I were to put a new batch of shrimps into water that is not half as dirty, they all die straight away. I think that's the case with your Malaysian shrimp.
I had a few of those living together with my cherry shrimps. They survived through a few catastrophes when most of the cherries died. My daughter accidentally emptied a whole bottle of fish food in the tank and it was left as it is while I was overaseas. I came back in time to save a handful of females and a single male. My tank is now back to capacity with those few repopulating.
O suggest you have a small cycled tank for your Malaysian shrimps and then slowly mix the water of the two tanks and finally migrate them over.
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